dbGaP Study Accession: phs002657
NIH Institute/Center: NIDDK
RADx Data Program: RADx-rad
Release Date: 11/07/2022
DOI: 10.60773/073r-9g87
Study Description: With older age and multiple comorbidities, dialysis patients are at high risk for serious complications, even death, from COVID-19. There is a large disproportionate representation of minorities, especially Blacks and Hispanics. Over 85% of hemodialysis patients travel three times a week to dialysis facilities to receive life-sustaining treatments and cannot shelter in place. There is a critical need to characterize COVID-19 transmission pathways in dialysis patients and clinics, identify potential coronavirus carriers, and develop procedures to curb the spread. With regular medical encounters, a large amount of data has been collected for each patient over time. These data have not been fully utilized for COVID-19 prediction and control in dialysis clinics. This study sought to leverage demographic, clinical, treatment, laboratory, socioeconomic, serological, metabolomic, wearable and machine-integrated sensors, and COVID-19 surveillance data to develop mathematical and statistical models and implement them in a large number of dialysis clinics. The mathematical and statistical modeling using multiple data resources helped to understand how COVID-19 spreads in dialysis facilities, identify potential COVID-19 patients before symptoms appear, and identify potential asymptomatic COVID-19 patients. Novel mathematical and statistical models were developed that fully utilize the high dimensional multimodal data available. This study capitalized on the intrinsic advantages of hemodialysis clinics to implement and validate the proposed prediction models. There was a firm belief that this cross-disciplinary effort would improve patient and staff safety while delivering high-quality, individualized care to a high-risk population.
Updated Date: 01/18/2024
Principal Investigator: Wang, Yuedong
Has Data Files: Yes
Study Domain: Artificial Intelligence and Machine Learning; Multimodal Surveillance
Data Collection Method: Wearable; Real-World Data
Keywords: Infectious Diseases; Kidney Disease; Predictive Modeling; Patient Safety; Prevention; Transmission in Dialysis Facilities; COVID Transmission; Bioengineering; Coronaviruses Diagnostics and Prognostics; Data Science
Study Design: Longitudinal Cohort
Multi-Center Study: TRUE
Study Sites: University of California-Santa Barbara; University of Pennsylvania; Renal Research Institute; Fresenius Medical Care North America
Data Types: Physical Activity; Clinical; Electronic Medical Records; Metabolomic; Other
Data Types, Other: Only a subset of total cohort for wearable data expected (N=30); Wearables Data
Study Start Date: 12/21/2021
Study End Date: 11/30/2023
Species: Human Data
Estimated Cohort Size: 120
Study Population Focus: Dialysis Patients; Adults; African American; Hispanic and Latino; Underserved/Vulnerable Population
Publication URL: https://pubmed.ncbi.nlm.nih.gov/37588769/; https://pubmed.ncbi.nlm.nih.gov/33878507/; https://pubmed.ncbi.nlm.nih.gov/33898967/; https://pubmed.ncbi.nlm.nih.gov/34230102/; https://pubmed.ncbi.nlm.nih.gov/34378318/; https://pubmed.ncbi.nlm.nih.gov/34530746/; https://pubmed.ncbi.nlm.nih.gov/36031854/; https://pubmed.ncbi.nlm.nih.gov/36106337/; https://pubmed.ncbi.nlm.nih.gov/36594047/; https://pubmed.ncbi.nlm.nih.gov/37771511/; https://pubmed.ncbi.nlm.nih.gov/33655270/; https://pubmed.ncbi.nlm.nih.gov/33685976/; https://pubmed.ncbi.nlm.nih.gov/33878507/; https://pubmed.ncbi.nlm.nih.gov/33898967/; https://pubmed.ncbi.nlm.nih.gov/34094520/; https://pubmed.ncbi.nlm.nih.gov/34230102/; https://pubmed.ncbi.nlm.nih.gov/34378318/; https://pubmed.ncbi.nlm.nih.gov/34530746/; https://pubmed.ncbi.nlm.nih.gov/36031854/; https://pubmed.ncbi.nlm.nih.gov/36106337/; https://pubmed.ncbi.nlm.nih.gov/36594047/; https://pubmed.ncbi.nlm.nih.gov/37771511/
Acknowledgement Statement: This study was supported through funding, 5R01DK130067-03, for the National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) as part of the RADx-rad program. The study PI, Dr. Yuedong Wang acknowledges support for this study from the National Institutes of Health (NIH). A special acknowledgment and gratitude to our collaborators, the research teams, and to the research participants that made this study possible. Approved users should acknowledge the provision of data access by dbGaP for accession phs002657.v1.p1, and the NIH RADx Data Hub. Approved users should also acknowledge the specific version(s) of the dataset(s) obtained from the NIH RADx Data Hub.
Funding Opportunity Announcement (FOA) Number: RFA-OD-20-016
NIH Grant or Contract Number(s): 5R01DK130067-03
Consent/Data Use Limitations: General Research Use
File Name | File Type | File Format(s) | # of Records | # of Variables | Metadata | Dictionary |
---|---|---|---|---|---|---|
rad_016_067-01_Treatment_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 1189859 | |||
rad_016_067-01_Labs_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 441790 | |||
rad_016_067-01_PatientInfo_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 5000 | |||
rad_016_067-01_Labs_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 441790 | |||
rad_016_067-01_PatientInfo_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 5000 |