dbGaP Study Accession: phs002544
NIH Institute/Center: NCATS
RADx Data Program: RADx-rad
Release Date: 01/26/2022
DOI: 10.60773/w5vb-c640
Updated Date: 09/27/2023
Study Description: This project was in response to the NIH's RADx-rad Emergency Responses to the COVID-pandemic for new or non-traditional technologies developed for single extracellular vesicle, exosome and extracellular RNA (exRNA) isolation and analysis and reposition them for detection of SARS-CoV-2. The project's group was a grantee in the NIH Common Fund Extracellular RNA Communication (ERC) Program advancing a new and emerging technology of Acoustofluidic Separation (AFS) for label-free, high yield and purity exosomes from biofluids which is coupled to extracellular RNA characterization using Surface Enhanced Raman Spectroscopy (SERS) for single EV identification. This project was to reposition the AFS EV technology and SERS for the non-invasive earliest detection of SARS-CoV-2 in saliva of infected patients. Host immunity to SARS-CoV-2 was also assessed in the saliva samples, permitting the earliest detection of SARS-CoV-2 infection and host immunity non-invasively in a saliva sample.
Principal Investigator: Wong, David T
Has Data Files: Yes
Study Domain: Virological Testing; Medical Device/Tool Development
Data Collection Method: Molecular (Nucleic Acid/PCR) Testing Device
Keywords: Host Immunity; Exosome based; Early Detection; Electric Field–Induced Release and Measurement (EFIRM); Surface Enhanced Raman Spectroscopy (SERS)
Study Design: Device Validation Study
Multi-Center Study: FALSE
Data Types: Clinical; Immunological
Study Start Date: 12/21/2020
Study End Date: 11/30/2022
Species: Human Data
Estimated Cohort Size: 90
Study Population Focus: N/A
Acknowledgement Statement: This study was supported through funding, 4U18TR003778-02, for the National Center for Advancing Translational Sciences (NCATS) as part of the RADx-rad program. Approved users should acknowledge the provision of data access by dbGaP for accession phs002544.v1.p1, and the NIH RADx Data Hub. Approved users should also acknowledge the specific version(s) of the dataset(s) obtained from the NIH RADx Data Hub.
Funding Opportunity Announcement (FOA) Number: RFA-OD-20-018
NIH Grant or Contract Number(s): 4U18TR003778-02
Consent/Data Use Limitations: General Research Use
File Name | File Type | File Format(s) | # of Records | # of Variables | Metadata | Dictionary |
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rad_018_778-01_DATA_SERS_ANALYTICALPERFORMANCEMETRICS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 999 | |||
rad_018_778-01_EFIRMCLINICALPERFORMANCEMETRICS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 12 | |||
rad_018_778-01_DATA_SERS_SPIKEDSAMPLE_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 999 | |||
rad_018_778-01_EFIRMCLINICALSAMPLE_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 163 | |||
rad_018_778-01_EFIRMCLINICALSAMPLERESULTS_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 552 | |||
rad_018_778-01_DATA_SERS_CLINICALPERFORMANCEMETRICS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 1003 | |||
rad_018_778-01_DATA_NAB_CLINICALPERFORMANCEMETRICS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 999 | |||
rad_018_778-01_DATA_NAB_CLINICALSAMPLE_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 154 | |||
rad_018_778-01_ucla_patient_total_80521_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 60 | |||
rad_018_778-01_EFIRMSPIKEDSAMPLERESULTS_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 54 | |||
rad_018_778-01_EFIRMSPIKEDSAMPLE_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 54 | |||
rad_018_778-01_DATA_SERS_SPIKEDSAMPLESRESULTS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 999 | |||
rad_018_778-01_DATA_NAB_ANALYTICALPERFORMANCEMETRICS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 999 | |||
rad_018_778-01_DATA_NAB_CLINICALSAMPLERESULTS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 997 | |||
rad_018_778-01_EFIRMCLINICALPERFORMANCEMETRICS_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 12 | |||
rad_018_778-01_ucla_patient_total_080521_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 60 | |||
rad_018_778-01_ucla_patient_total_80521_V002_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 60 | |||
rad_018_778-01_ucla_patient_total_80521_DATA_transformcopy.csv | Tabular Data - Harmonized | csv | 60 | |||
rad_018_778-01_DATA_NAB_SPIKEDSAMPLERESULTS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 999 | |||
rad_018_778-01_DATA_SERS_CLINICALSAMPLERESULTS_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 20 | |||
rad_018_778-01_ucla_patient_total_80521_V002_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 60 | |||
rad_018_778-01_DATA_SERS_CLINICALSAMPLES_DATA_origcopy.csv | Tabular Data - Non-harmonized | csv | 20 |