dbGaP Study Accession: phs002744
NIH Institute/Center: NIAAA
RADx Data Program: RADx-rad
DOI: 10.60773/7h8k-bz16
Release Date: 11/10/2022
Study Description: The data shared includes the response of sensor to different concentrations of pseudovirus and inactivated SARS-CoV-2 virus samples. The study measured sensitivity and specificity of the response. The study measured role of matrix and buffer conditions on assay response.
Updated Date: 08/24/2023
Principal Investigator: Salaita, Khalid S
Has Data Files: Yes
Study Domain: Digital Health Applications; Virological Testing
Data Collection Method: Smartphone
Keywords: Biological Assay; Commercialization; Cost; Enzymes; Innovation; Ligand Binding; Pathway Interactions; RNA; Reproducibility; Viral Detection via Smartphone
Study Design: Device Validation
Multi-Center Study: No
Data Types: Imaging; Microscopy
Study Start Date: 12/21/2020
Study End Date: 11/30/2022
Estimated Cohort Size: 0
Study Population Focus: N/A
Publication URL: https://pubmed.ncbi.nlm.nih.gov/34242462/; https://pubmed.ncbi.nlm.nih.gov/34309076/; https://pubmed.ncbi.nlm.nih.gov/35347272/; https://pubmed.ncbi.nlm.nih.gov/36909543/
Acknowledgement Statement: This study was supported through funding, 3U01AA029345-02S1, for the National Institute on Alcohol Abuse and Alcoholism (NIAAA) as part of the RADx-rad program. Approved users should acknowledge the provision of data access by dbGaP for accession phs002744.v1.p1, and the NIH RADx Data Hub. Approved users should also acknowledge the specific version(s) of the dataset(s) obtained from the NIH RADx Data Hub.
Funding Opportunity Announcement (FOA) Number: PA-20-272
NIH Grant or Contract Number(s): 3U01AA029345-02S1
Consent/Data Use Limitations: General Research Use
Variable Name | Label |
---|---|
antigen_id | - |
antigen_name | - |
antigen_region | - |
assay_readout | - |
assay_readout_description | - |
assay_readout_unit | - |
assay_result | - |
assay_result_other | - |
biorecognition_type | - |
chip_detection_time | - |
chip_detection_time_unit | - |
chip_surface_aptamer_density | - |
chip_surface_aptamer_density_unit | - |
dna_motor_diameter | - |
dna_motor_diameter_unit | - |
dna_motor_frame | - |
dna_motor_incubation_time | - |
dna_motor_incubation_time_unit | - |
dna_motor_particle | - |
dna_motor_particle_aptamer_density | - |
dna_motor_particle_aptamer_density_unit | - |
dna_motor_trajectory | - |
dna_motor_x_position | - |
dna_motor_y_position | - |
gisaid_clade | - |
gisaid_id | - |
immobilization_reagent_name | - |
immobilization_reagent_source | - |
immobilization_reagent_source_url | - |
isolate_name | - |
limit_of_blank | - |
limit_of_blank_unit | - |
limit_of_detection | - |
limit_of_detection_detail | - |
limit_of_detection_reference_gene | - |
limit_of_detection_unit | - |
measurement_type | - |
nucleotide_db_id | - |
pango_lineage | - |
particle_aptamer_formulation | - |
particle_aptamer_id | - |
particle_aptamer_kd | - |
particle_aptamer_kd_method | - |
particle_aptamer_kd_unit | - |
particle_aptamer_modification_5prime | - |
particle_aptamer_modification_5prime_role | - |
particle_aptamer_purity | - |
particle_aptamer_sequence | - |
particle_aptamer_source | - |
particle_aptamer_source_url | - |
particle_aptamer_target_organism_name | - |
particle_aptamer_target_organism_taxonomy_id | - |
particle_aptamer_target_protein_id | - |
particle_aptamer_target_protein_name | - |
particle_aptamer_target_protein_region | - |
protocol_id | - |
readout_instrument | - |
sample_concentration | - |
sample_concentration_reference_gene | - |
sample_concentration_unit | - |
sample_group | - |
sample_id | - |
sample_media | - |
sample_media_id | - |
sample_media_source | - |
sample_media_source_name | - |
sample_media_source_url | - |
sample_size | - |
signal_detection | - |
surface | - |
surface_aptamer_formulation | - |
surface_aptamer_id | - |
surface_aptamer_kd | - |
surface_aptamer_kd_method | - |
surface_aptamer_kd_unit | - |
surface_aptamer_purity | - |
surface_aptamer_sequence | - |
surface_aptamer_source | - |
surface_aptamer_source_url | - |
surface_aptamer_target_organism_name | - |
surface_aptamer_target_organism_taxonomy_id | - |
surface_aptamer_target_protein_id | - |
surface_aptamer_target_protein_name | - |
surface_aptamer_target_protein_region | - |
target_analyte_name | - |
target_analyte_type | - |
target_organism_name | - |
target_organism_taxonomy_id | - |
technology_description | - |
technology_platform | - |
technology_reference | - |
turnaround_time | - |
turnaround_time_unit | - |
virus_batch_number | - |
virus_location | - |
virus_preinactivation_tcid50 | - |
virus_preinactivation_tcid50_unit | - |
virus_sample_concentration | - |
virus_sample_concentration_reference_gene | - |
virus_sample_concentration_unit | - |
virus_sample_formulation | - |
virus_sample_genome_equivalents | - |
virus_sample_genome_equivalents_reference_gene | - |
virus_sample_genome_equivalents_unit | - |
virus_sample_grow_cell_line | - |
virus_sample_id | - |
virus_sample_inactivation_method | - |
virus_sample_source | - |
virus_sample_source_url | - |
virus_sample_type | - |
virus_shortname | - |
virus_source | - |
who_label | - |